Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 MRPS18AP1-201ENST00000414458 589 ntBASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 AC241585.1-201ENST00000433527 519 ntBASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CR383656.12-201ENST00000549567 513 ntBASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 TOP3BP1-201ENST00000420768 1380 ntBASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 HLA-J-202ENST00000469281 1241 ntBASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC52A1Q9NWF4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 SPDYE22P-201ENST00000582158 798 ntBASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC52A1Q9NWF4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 TNXA-203ENST00000507684 2038 ntBASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 TSSK5P-201ENST00000423978 907 ntBASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 SERBP1P5-201ENST00000510079 1181 ntBASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 MIR4453-201ENST00000584019 89 ntBASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC52A1Q9NWF4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SLC52A1Q9NWF4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC24.45■■□□□ 1.51
SLC52A1Q9NWF4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.51
SLC52A1Q9NWF4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.45■■□□□ 1.51
SLC52A1Q9NWF4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms