Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 AC100803.2-201ENST00000562459 1963 ntBASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 MIR718-201ENST00000390190 70 ntBASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 AC132872.4-202ENST00000622924 2756 ntBASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
C12orf4Q9NQ89 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 Z99916.2-201ENST00000604037 246 ntBASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms