Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC105020.1-201ENST00000435356 2205 ntBASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 HCG11-201ENST00000411553 5696 ntBASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 AC092068.3-201ENST00000587894 2016 ntBASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 AL590787.1-201ENST00000568856 1315 ntBASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 SART3-203ENST00000546611 1184 ntBASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 AC064862.7-201ENST00000604520 867 ntBASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSER1Q9C0I3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 SAPCD2P3-201ENST00000455031 850 ntBASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 AF238378.1-201ENST00000526806 358 ntBASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 NCF1C-201ENST00000438382 1427 ntBASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 NKILA-202ENST00000614771 2598 ntBASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSER1Q9C0I3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 AL589182.2-201ENST00000619332 1049 ntBASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 AC005915.1-201ENST00000624912 2018 ntBASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.3■□□□□ 0.68
CCSER1Q9C0I3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCSER1Q9C0I3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCSER1Q9C0I3 AC106886.4-201ENST00000623557 2502 ntBASIC19.29■□□□□ 0.68
CCSER1Q9C0I3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCSER1Q9C0I3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCSER1Q9C0I3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms