Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CHCHD2P8-201ENST00000429873 447 ntBASIC17.39■□□□□ 0.37
NDNQ99608 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDNQ99608 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.39■□□□□ 0.37
NDNQ99608 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.39■□□□□ 0.37
NDNQ99608 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.39■□□□□ 0.37
NDNQ99608 AP005901.3-202ENST00000581653 237 ntBASIC17.39■□□□□ 0.37
NDNQ99608 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.39■□□□□ 0.37
NDNQ99608 AL121672.3-201ENST00000608644 468 ntBASIC17.39■□□□□ 0.37
NDNQ99608 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDNQ99608 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.39■□□□□ 0.37
NDNQ99608 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.39■□□□□ 0.37
NDNQ99608 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.39■□□□□ 0.37
NDNQ99608 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
NDNQ99608 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 AC016396.2-201ENST00000562575 1417 ntBASIC17.38■□□□□ 0.37
NDNQ99608 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NDNQ99608 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NDNQ99608 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.38■□□□□ 0.37
NDNQ99608 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NDNQ99608 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.38■□□□□ 0.37
NDNQ99608 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.38■□□□□ 0.37
NDNQ99608 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.38■□□□□ 0.37
NDNQ99608 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.38■□□□□ 0.37
NDNQ99608 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.38■□□□□ 0.37
NDNQ99608 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NDNQ99608 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NDNQ99608 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.38■□□□□ 0.37
NDNQ99608 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.38■□□□□ 0.37
NDNQ99608 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.38■□□□□ 0.37
NDNQ99608 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
NDNQ99608 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDNQ99608 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.38■□□□□ 0.37
NDNQ99608 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.37■□□□□ 0.37
NDNQ99608 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.37■□□□□ 0.37
NDNQ99608 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NDNQ99608 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.37■□□□□ 0.37
NDNQ99608 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.37■□□□□ 0.37
NDNQ99608 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 AC060834.1-201ENST00000443027 2032 ntBASIC17.37■□□□□ 0.37
NDNQ99608 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NDNQ99608 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 AC116353.5-201ENST00000638148 1699 ntBASIC17.37■□□□□ 0.37
NDNQ99608 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 PCED1CP-201ENST00000419887 785 ntBASIC17.37■□□□□ 0.37
NDNQ99608 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.37■□□□□ 0.37
NDNQ99608 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.37■□□□□ 0.37
NDNQ99608 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.37■□□□□ 0.37
NDNQ99608 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.37■□□□□ 0.37
NDNQ99608 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.37■□□□□ 0.37
NDNQ99608 AC116407.4-201ENST00000623319 1061 ntBASIC17.37■□□□□ 0.37
NDNQ99608 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 LINC00554-201ENST00000564841 3011 ntBASIC17.37■□□□□ 0.37
NDNQ99608 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.37■□□□□ 0.37
NDNQ99608 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.37■□□□□ 0.37
NDNQ99608 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDNQ99608 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.37■□□□□ 0.37
NDNQ99608 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
NDNQ99608 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NDNQ99608 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDNQ99608 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDNQ99608 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDNQ99608 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDNQ99608 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NDNQ99608 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms