Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 LINC00982-205ENST00000420957 435 ntBASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 AL121772.3-201ENST00000610840 674 ntBASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 OR6D1P-202ENST00000641007 5290 ntBASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 AC092068.3-201ENST00000587894 2016 ntBASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM5Q96HC4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 AC005915.1-201ENST00000624912 2018 ntBASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 TSPY19P-201ENST00000418461 509 ntBASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 TSPY18P-201ENST00000441642 509 ntBASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 HCG4P8-203ENST00000443049 980 ntBASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM5Q96HC4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms