Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 DNAJB3-202ENST00000449667 1266 ntBASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ATP6V0A1Q93050 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 PMS2P2-201ENST00000425039 1128 ntBASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 AC005829.1-201ENST00000570002 483 ntBASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A1Q93050 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 AP002414.1-201ENST00000391405 1147 ntBASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 PTCHD3P3-201ENST00000403073 906 ntBASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 AL138688.1-201ENST00000624851 1594 ntBASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A1Q93050 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 AL590787.1-201ENST00000568856 1315 ntBASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 AC068880.1-201ENST00000507289 2297 ntBASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP6V0A1Q93050 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms