Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
USP13Q92995 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.12■□□□□ 0.49
USP13Q92995 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP13Q92995 AC108073.2-201ENST00000464002 357 ntBASIC18.12■□□□□ 0.49
USP13Q92995 AC002558.1-201ENST00000488906 803 ntBASIC18.12■□□□□ 0.49
USP13Q92995 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.12■□□□□ 0.49
USP13Q92995 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.12■□□□□ 0.49
USP13Q92995 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.12■□□□□ 0.49
USP13Q92995 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.12■□□□□ 0.49
USP13Q92995 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.12■□□□□ 0.49
USP13Q92995 AC008667.4-201ENST00000607370 168 ntBASIC18.12■□□□□ 0.49
USP13Q92995 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
USP13Q92995 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.12■□□□□ 0.49
USP13Q92995 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP13Q92995 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
USP13Q92995 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.12■□□□□ 0.49
USP13Q92995 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP13Q92995 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
USP13Q92995 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
USP13Q92995 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP13Q92995 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
USP13Q92995 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 IGHV3-65-201ENST00000523210 341 ntBASIC18.11■□□□□ 0.49
USP13Q92995 MIR3687-2-201ENST00000577708 61 ntBASIC18.11■□□□□ 0.49
USP13Q92995 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.11■□□□□ 0.49
USP13Q92995 MIR3687-1-201ENST00000614492 61 ntBASIC18.11■□□□□ 0.49
USP13Q92995 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.11■□□□□ 0.49
USP13Q92995 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP13Q92995 KRT18P55-202ENST00000578578 1546 ntBASIC18.11■□□□□ 0.49
USP13Q92995 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.11■□□□□ 0.49
USP13Q92995 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.11■□□□□ 0.49
USP13Q92995 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP13Q92995 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP13Q92995 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 AC097637.2-201ENST00000624096 1997 ntBASIC18.1■□□□□ 0.49
USP13Q92995 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.1■□□□□ 0.49
USP13Q92995 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.1■□□□□ 0.49
USP13Q92995 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
USP13Q92995 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.1■□□□□ 0.49
USP13Q92995 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.1■□□□□ 0.49
USP13Q92995 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.1■□□□□ 0.49
USP13Q92995 CRYGEP-201ENST00000412192 528 ntBASIC18.1■□□□□ 0.49
USP13Q92995 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP13Q92995 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.1■□□□□ 0.49
USP13Q92995 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.1■□□□□ 0.49
USP13Q92995 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.1■□□□□ 0.49
USP13Q92995 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.1■□□□□ 0.49
USP13Q92995 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
USP13Q92995 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
USP13Q92995 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
USP13Q92995 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP13Q92995 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.09■□□□□ 0.49
USP13Q92995 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.09■□□□□ 0.49
USP13Q92995 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.09■□□□□ 0.49
USP13Q92995 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
USP13Q92995 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
USP13Q92995 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP13Q92995 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP13Q92995 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms