Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF397Q8NF99 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 AL603756.1-201ENST00000606511 2163 ntBASIC19.19■□□□□ 0.66
ZNF397Q8NF99 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 AC026691.1-201ENST00000602502 2017 ntBASIC19.19■□□□□ 0.66
ZNF397Q8NF99 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 HLA-F-220ENST00000434407 884 ntBASIC19.19■□□□□ 0.66
ZNF397Q8NF99 AC022616.7-201ENST00000525383 220 ntBASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF397Q8NF99 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 TSPY12P-201ENST00000421279 868 ntBASIC19.18■□□□□ 0.66
ZNF397Q8NF99 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.18■□□□□ 0.66
ZNF397Q8NF99 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 FER1L4-210ENST00000615531 5998 ntBASIC19.18■□□□□ 0.66
ZNF397Q8NF99 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF397Q8NF99 AL391807.1-203ENST00000604392 2365 ntBASIC19.18■□□□□ 0.66
ZNF397Q8NF99 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 KRT18P48-201ENST00000434763 852 ntBASIC19.17■□□□□ 0.66
ZNF397Q8NF99 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 AC112698.1-201ENST00000510299 916 ntBASIC19.17■□□□□ 0.66
ZNF397Q8NF99 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 AL136038.4-201ENST00000603606 1261 ntBASIC19.17■□□□□ 0.66
ZNF397Q8NF99 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 HYMAI.1-201ENST00000620949 238 ntBASIC19.17■□□□□ 0.66
ZNF397Q8NF99 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF397Q8NF99 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms