Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 AC113347.1-201ENST00000413321 391 ntBASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 AC005363.2-201ENST00000618631 242 ntBASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 AC097493.4-201ENST00000641197 219 ntBASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.27■□□□□ 0.04
DNAAF1Q8NEP3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.27■□□□□ 0.03
DNAAF1Q8NEP3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 AC007326.2-201ENST00000624224 7579 ntBASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 AC012306.2-201ENST00000609350 630 ntBASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DNAAF1Q8NEP3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 AC116353.5-201ENST00000638148 1699 ntBASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 TSPY12P-201ENST00000421279 868 ntBASIC15.25■□□□□ 0.03
DNAAF1Q8NEP3 AL137013.1-201ENST00000432946 1228 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms