Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 FAAHP1-202ENST00000446499 1238 ntBASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 SCARNA2-201ENST00000458748 420 ntBASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 AC009078.2-202ENST00000463353 338 ntBASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 RNPS1P1-201ENST00000507437 918 ntBASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 AL139288.1-201ENST00000623748 933 ntBASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 RPS2P1-201ENST00000434010 821 ntBASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 AP002469.2-201ENST00000531724 424 ntBASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 AL160237.2-201ENST00000556165 472 ntBASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 AL022326.1-202ENST00000641533 845 ntBASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC82Q8N4S0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 MRPL3P1-201ENST00000400109 1033 ntBASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 HNRNPDP1-201ENST00000439535 754 ntBASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 AC025062.2-201ENST00000605477 670 ntBASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 AL023806.1-201ENST00000603994 1649 ntBASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC82Q8N4S0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC82Q8N4S0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC82Q8N4S0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC82Q8N4S0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC82Q8N4S0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC82Q8N4S0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC82Q8N4S0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms