Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC23.66■■□□□ 1.38
XRN1Q8IZH2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 EGFEM1P-202ENST00000431685 1563 ntBASIC23.65■■□□□ 1.38
XRN1Q8IZH2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC23.65■■□□□ 1.38
XRN1Q8IZH2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
XRN1Q8IZH2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 HLA-V-204ENST00000476601 1289 ntBASIC23.64■■□□□ 1.38
XRN1Q8IZH2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 AC004233.3-201ENST00000607794 1269 ntBASIC23.64■■□□□ 1.38
XRN1Q8IZH2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC23.64■■□□□ 1.38
XRN1Q8IZH2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 API5-211ENST00000534695 560 ntTSL 5 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 HILS1-202ENST00000545329 423 ntBASIC23.64■■□□□ 1.37
XRN1Q8IZH2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 AC018529.1-201ENST00000613063 361 ntBASIC23.64■■□□□ 1.37
XRN1Q8IZH2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
XRN1Q8IZH2 GRAMD4P3-201ENST00000621665 1669 ntBASIC23.64■■□□□ 1.37
XRN1Q8IZH2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 AC138028.4-201ENST00000564984 1845 ntBASIC23.63■■□□□ 1.37
XRN1Q8IZH2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 AP3S2-216ENST00000617003 1561 ntBASIC23.63■■□□□ 1.37
XRN1Q8IZH2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
XRN1Q8IZH2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
XRN1Q8IZH2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
XRN1Q8IZH2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC23.62■■□□□ 1.37
XRN1Q8IZH2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
XRN1Q8IZH2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
XRN1Q8IZH2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC23.62■■□□□ 1.37
XRN1Q8IZH2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms