Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 KRT18P22-201ENST00000402024 1347 ntBASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 AC078925.2-201ENST00000624013 1973 ntBASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM1Q8IYB3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 AP000525.1-201ENST00000608286 694 ntBASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 AL139327.4-201ENST00000612362 153 ntBASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 AL358472.4-201ENST00000633140 710 ntBASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM1Q8IYB3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SRRM1Q8IYB3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 AC006449.5-201ENST00000610658 2098 ntBASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 AC093525.9-201ENST00000624961 1746 ntBASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 SLC25A1P3-201ENST00000395415 828 ntBASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM1Q8IYB3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms