Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 FAM210CP-201ENST00000445714 574 ntBASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 TOB2P1-201ENST00000469761 992 ntBASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 AC087388.1-201ENST00000571370 1112 ntBASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 AP002414.4-201ENST00000589764 1148 ntBASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC83Q8IWF9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC83Q8IWF9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 AD001527.2-201ENST00000622994 785 ntBASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 EGFEM1P-202ENST00000431685 1563 ntBASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 TNRC18P3-201ENST00000441896 2691 ntBASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC83Q8IWF9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 DRAXINP1-201ENST00000437611 948 ntBASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms