Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDKL3Q8IVW4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 AC092053.1-201ENST00000605787 1936 ntBASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 AP000867.3-201ENST00000524675 377 ntBASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 MIR3180-1-201ENST00000580374 94 ntBASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 MIR3180-3-201ENST00000584616 94 ntBASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 AL358472.4-201ENST00000633140 710 ntBASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 AC011676.5-201ENST00000624864 2660 ntBASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.78■□□□□ 0.44
CDKL3Q8IVW4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 POM121L3P-201ENST00000419331 1163 ntBASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 AC092329.2-201ENST00000598402 547 ntBASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 NPAP1P7-201ENST00000613027 823 ntBASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKL3Q8IVW4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 CROCCP1-201ENST00000426910 5675 ntBASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.77■□□□□ 0.43
CDKL3Q8IVW4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 KRT18P35-201ENST00000510488 1269 ntBASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AC012615.1-201ENST00000565797 1299 ntBASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms