Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TMC4Q7Z404 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.94■□□□□ 0.94
TMC4Q7Z404 BASP1P1-201ENST00000430708 665 ntBASIC20.94■□□□□ 0.94
TMC4Q7Z404 SLC25A6P5-201ENST00000435663 894 ntBASIC20.94■□□□□ 0.94
TMC4Q7Z404 KLF2P3-201ENST00000451977 1087 ntBASIC20.94■□□□□ 0.94
TMC4Q7Z404 AC093214.1-201ENST00000511688 1107 ntBASIC20.94■□□□□ 0.94
TMC4Q7Z404 IGHV3-62-201ENST00000520057 340 ntBASIC20.94■□□□□ 0.94
TMC4Q7Z404 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.94■□□□□ 0.94
TMC4Q7Z404 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.94■□□□□ 0.94
TMC4Q7Z404 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.94■□□□□ 0.94
TMC4Q7Z404 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.94■□□□□ 0.94
TMC4Q7Z404 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TMC4Q7Z404 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC4Q7Z404 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 MIR3909-201ENST00000579518 119 ntBASIC20.93■□□□□ 0.94
TMC4Q7Z404 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 ABALON-201ENST00000629058 1903 ntBASIC20.93■□□□□ 0.94
TMC4Q7Z404 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC4Q7Z404 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.93■□□□□ 0.94
TMC4Q7Z404 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 INGX-202ENST00000489074 768 ntBASIC20.92■□□□□ 0.94
TMC4Q7Z404 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 AC239800.4-201ENST00000603712 296 ntBASIC20.92■□□□□ 0.94
TMC4Q7Z404 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.92■□□□□ 0.94
TMC4Q7Z404 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC4Q7Z404 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMC4Q7Z404 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
TMC4Q7Z404 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms