Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 DZIP1-205ENST00000466027 1580 ntTSL 220.89■□□□□ 0.947e-6■□□□□ 9
LARP4Q71RC2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.877e-6■□□□□ 9
LARP4Q71RC2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.31■□□□□ 0.847e-6■□□□□ 9
LARP4Q71RC2 AC005224.4-201ENST00000583262 1652 ntBASIC20.07■□□□□ 0.87e-6■□□□□ 9
LARP4Q71RC2 R3HDM4-206ENST00000590454 1006 ntTSL 320.04■□□□□ 0.87e-6■□□□□ 9
LARP4Q71RC2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.55■□□□□ 0.727e-6■□□□□ 9
LARP4Q71RC2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.72e-7■□□□□ 9
LARP4Q71RC2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.44■□□□□ 0.72e-7■□□□□ 9
LARP4Q71RC2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.06■□□□□ 0.642e-7■□□□□ 9
LARP4Q71RC2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.632e-7■□□□□ 9
LARP4Q71RC2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.627e-6■□□□□ 9
LARP4Q71RC2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.77■□□□□ 0.591e-6■□□□□ 9
LARP4Q71RC2 MFSD10-203ENST00000503596 1589 ntTSL 518.76■□□□□ 0.592e-7■□□□□ 9
LARP4Q71RC2 MFSD10-210ENST00000514031 950 ntTSL 218.62■□□□□ 0.572e-7■□□□□ 9
LARP4Q71RC2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.42■□□□□ 0.547e-6■□□□□ 9
LARP4Q71RC2 AP2M1-211ENST00000460862 551 ntTSL 418.33■□□□□ 0.522e-7■□□□□ 9
LARP4Q71RC2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.29■□□□□ 0.527e-6■□□□□ 9
LARP4Q71RC2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.522e-7■□□□□ 9
LARP4Q71RC2 AP2M1-204ENST00000427072 557 ntTSL 418.1■□□□□ 0.492e-7■□□□□ 9
LARP4Q71RC2 AP2M1-214ENST00000466598 684 ntTSL 218.1■□□□□ 0.492e-7■□□□□ 9
LARP4Q71RC2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.08■□□□□ 0.482e-7■□□□□ 9
LARP4Q71RC2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.471e-6■□□□□ 9
LARP4Q71RC2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.477e-6■□□□□ 9
LARP4Q71RC2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.444e-8■□□□□ 9
LARP4Q71RC2 USP10-208ENST00000563386 590 ntTSL 417.33■□□□□ 0.362e-7■□□□□ 9
LARP4Q71RC2 USP10-203ENST00000562092 254 ntTSL 516.82■□□□□ 0.282e-7■□□□□ 9
LARP4Q71RC2 USP10-210ENST00000563892 570 ntTSL 316.82■□□□□ 0.282e-7■□□□□ 9
LARP4Q71RC2 USP10-216ENST00000569511 571 ntTSL 516.82■□□□□ 0.282e-7■□□□□ 9
LARP4Q71RC2 USP10-205ENST00000562743 888 ntTSL 216.78■□□□□ 0.282e-7■□□□□ 9
LARP4Q71RC2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.7■□□□□ 0.262e-7■□□□□ 9
LARP4Q71RC2 AP2M1-219ENST00000484469 558 ntTSL 316.64■□□□□ 0.252e-7■□□□□ 9
LARP4Q71RC2 ENY2-215ENST00000523335 1540 ntTSL 216.6■□□□□ 0.254e-15■□□□□ 9
LARP4Q71RC2 AP2M1-220ENST00000487958 796 ntTSL 216.48■□□□□ 0.232e-7■□□□□ 9
LARP4Q71RC2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-7■□□□□ 9
LARP4Q71RC2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.39■□□□□ 0.212e-7■□□□□ 9
LARP4Q71RC2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.33■□□□□ 0.22e-7■□□□□ 9
LARP4Q71RC2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.192e-7■□□□□ 9
LARP4Q71RC2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.187e-6■□□□□ 9
LARP4Q71RC2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.162e-7■□□□□ 9
LARP4Q71RC2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.96■□□□□ 0.152e-7■□□□□ 9
LARP4Q71RC2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.96■□□□□ 0.152e-7■□□□□ 9
LARP4Q71RC2 MFSD10-204ENST00000507272 1575 ntTSL 515.87■□□□□ 0.132e-7■□□□□ 9
LARP4Q71RC2 PLK1-205ENST00000564794 683 ntTSL 515.75■□□□□ 0.114e-8■□□□□ 9
LARP4Q71RC2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.077e-6■□□□□ 9
LARP4Q71RC2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.067e-6■□□□□ 9
LARP4Q71RC2 USP10-211ENST00000564566 561 ntTSL 415.31■□□□□ 0.042e-7■□□□□ 9
LARP4Q71RC2 ENY2-212ENST00000522407 541 ntTSL 415.27■□□□□ 0.044e-15■□□□□ 9
LARP4Q71RC2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.037e-6■□□□□ 9
LARP4Q71RC2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.017e-6■□□□□ 9
LARP4Q71RC2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -07e-6■□□□□ 9
LARP4Q71RC2 HS3ST3B1-202ENST00000466596 2808 ntTSL 214.99□□□□□ -0.017e-6■□□□□ 9
LARP4Q71RC2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.012e-7■□□□□ 9
LARP4Q71RC2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.017e-6■□□□□ 9
LARP4Q71RC2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.96□□□□□ -0.017e-6■□□□□ 9
LARP4Q71RC2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.032e-7■□□□□ 9
LARP4Q71RC2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.042e-7■□□□□ 9
LARP4Q71RC2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.78□□□□□ -0.047e-6■□□□□ 9
LARP4Q71RC2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.057e-6■□□□□ 9
LARP4Q71RC2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.062e-7■□□□□ 9
LARP4Q71RC2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.61□□□□□ -0.072e-7■□□□□ 9
LARP4Q71RC2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.53□□□□□ -0.081e-6■□□□□ 9
LARP4Q71RC2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.52□□□□□ -0.087e-6■□□□□ 9
LARP4Q71RC2 USP10-204ENST00000562283 569 ntTSL 414.52□□□□□ -0.092e-7■□□□□ 9
LARP4Q71RC2 ECH1-217ENST00000602115 209 ntTSL 314.51□□□□□ -0.097e-6■□□□□ 9
LARP4Q71RC2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.5□□□□□ -0.097e-6■□□□□ 9
LARP4Q71RC2 VPS35-210ENST00000568784 4017 ntTSL 1 (best)14.42□□□□□ -0.12e-7■□□□□ 9
LARP4Q71RC2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.17e-6■□□□□ 9
LARP4Q71RC2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.39□□□□□ -0.117e-6■□□□□ 9
LARP4Q71RC2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.114e-8■□□□□ 9
LARP4Q71RC2 TCP1-211ENST00000539756 780 ntTSL 314.28□□□□□ -0.122e-7■□□□□ 9
LARP4Q71RC2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.24□□□□□ -0.137e-6■□□□□ 9
LARP4Q71RC2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.164e-8■□□□□ 9
LARP4Q71RC2 CHMP3-202ENST00000393773 727 ntTSL 313.84□□□□□ -0.197e-6■□□□□ 9
LARP4Q71RC2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.8□□□□□ -0.22e-7■□□□□ 9
LARP4Q71RC2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.27e-6■□□□□ 9
LARP4Q71RC2 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.237e-6■□□□□ 9
LARP4Q71RC2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.254e-8■□□□□ 9
LARP4Q71RC2 AP2M1-209ENST00000448139 601 ntTSL 513.51□□□□□ -0.252e-7■□□□□ 9
LARP4Q71RC2 HSD17B4-203ENST00000442060 2686 ntTSL 513.43□□□□□ -0.267e-6■□□□□ 9
LARP4Q71RC2 ENY2-203ENST00000517350 2150 ntTSL 1 (best)13.41□□□□□ -0.264e-15■□□□□ 9
LARP4Q71RC2 AP2M1-216ENST00000472560 910 ntTSL 213.29□□□□□ -0.282e-7■□□□□ 9
LARP4Q71RC2 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.37e-6■□□□□ 9
LARP4Q71RC2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.37e-6■□□□□ 9
LARP4Q71RC2 AP2M1-210ENST00000455925 545 ntTSL 413.17□□□□□ -0.32e-7■□□□□ 9
LARP4Q71RC2 PNKP-223ENST00000629179 811 ntTSL 413□□□□□ -0.337e-6■□□□□ 9
LARP4Q71RC2 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.357e-6■□□□□ 9
LARP4Q71RC2 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.367e-6■□□□□ 9
LARP4Q71RC2 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.387e-6■□□□□ 9
LARP4Q71RC2 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.392e-12■□□□□ 9
LARP4Q71RC2 FADS2-204ENST00000517312 588 ntTSL 512.53□□□□□ -0.47e-6■□□□□ 9
LARP4Q71RC2 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.46□□□□□ -0.417e-6■□□□□ 9
LARP4Q71RC2 SYNJ2BP-COX16-204ENST00000618385 656 ntTSL 312.46□□□□□ -0.417e-6■□□□□ 9
LARP4Q71RC2 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.437e-6■□□□□ 9
LARP4Q71RC2 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC12.38□□□□□ -0.432e-7■□□□□ 9
LARP4Q71RC2 USP10-202ENST00000540269 3070 ntTSL 1 (best)12.37□□□□□ -0.432e-7■□□□□ 9
LARP4Q71RC2 CAPNS1-213ENST00000592354 690 ntTSL 212.26□□□□□ -0.457e-6■□□□□ 9
LARP4Q71RC2 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.2□□□□□ -0.462e-12■□□□□ 9
LARP4Q71RC2 ECH1-204ENST00000595470 560 ntTSL 212.18□□□□□ -0.467e-6■□□□□ 9
LARP4Q71RC2 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC12.07□□□□□ -0.487e-6■□□□□ 9
LARP4Q71RC2 COG8-207ENST00000562949 887 ntTSL 312.02□□□□□ -0.497e-6■□□□□ 9
Retrieved 100 of 15,922 protein–RNA pairs in 271.9 ms