Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 AC139887.3-201ENST00000568585 713 ntBASIC18.17■□□□□ 0.5
RNF43Q68DV7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AC018695.7-201ENST00000624587 2492 ntBASIC18.16■□□□□ 0.5
RNF43Q68DV7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AC103564.2-201ENST00000432853 1299 ntBASIC18.16■□□□□ 0.5
RNF43Q68DV7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 SART3-203ENST00000546611 1184 ntBASIC18.16■□□□□ 0.5
RNF43Q68DV7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 LINC02084-201ENST00000606069 1096 ntBASIC18.16■□□□□ 0.5
RNF43Q68DV7 AL355385.1-201ENST00000606123 409 ntBASIC18.16■□□□□ 0.5
RNF43Q68DV7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AL139288.1-201ENST00000623748 933 ntBASIC18.16■□□□□ 0.5
RNF43Q68DV7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF43Q68DV7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF43Q68DV7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 AL353593.2-201ENST00000602529 1483 ntBASIC18.15■□□□□ 0.5
RNF43Q68DV7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 AL049757.1-201ENST00000616842 1596 ntBASIC18.15■□□□□ 0.5
RNF43Q68DV7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms