Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 FO538757.1-201ENST00000623083 1397 ntBASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 HMGA1P7-201ENST00000406908 502 ntBASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 TREML5P-201ENST00000421694 576 ntBASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 AC026150.2-201ENST00000564693 1156 ntBASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 AL390754.1-201ENST00000619088 582 ntBASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD4Q5XG99 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 FAM207CP-201ENST00000443486 507 ntBASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 AC005225.4-201ENST00000557330 545 ntBASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 AL009183.1-201ENST00000603760 355 ntBASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 AC012569.1-201ENST00000591191 1524 ntBASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 AC008677.1-201ENST00000519230 1561 ntBASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD4Q5XG99 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms