Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 BX088651.1-201ENST00000540551 451 ntBASIC13.8□□□□□ -0.2
FAM78BQ5VT40 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 AL023803.3-201ENST00000615559 522 ntBASIC13.8□□□□□ -0.2
FAM78BQ5VT40 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 AL603756.1-201ENST00000606511 2163 ntBASIC13.79□□□□□ -0.2
FAM78BQ5VT40 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.79□□□□□ -0.2
FAM78BQ5VT40 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 AC132872.4-202ENST00000622924 2756 ntBASIC13.78□□□□□ -0.2
FAM78BQ5VT40 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 TSPY15P-201ENST00000457163 923 ntBASIC13.78□□□□□ -0.2
FAM78BQ5VT40 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM78BQ5VT40 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms