Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1AP62820 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 AC046185.3-201ENST00000623228 1824 ntBASIC15.23■□□□□ 0.03
RAB1AP62820 AC004870.1-201ENST00000315132 882 ntBASIC15.23■□□□□ 0.03
RAB1AP62820 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB1AP62820 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.23■□□□□ 0.03
RAB1AP62820 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 AC079776.2-201ENST00000641154 1609 ntBASIC15.23■□□□□ 0.03
RAB1AP62820 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB1AP62820 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 AC084018.2-201ENST00000613093 2607 ntBASIC15.23■□□□□ 0.03
RAB1AP62820 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1AP62820 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.23■□□□□ 0.03
RAB1AP62820 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1AP62820 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1AP62820 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 AL356309.3-201ENST00000624132 1934 ntBASIC15.22■□□□□ 0.03
RAB1AP62820 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1AP62820 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 SPDYE21P-201ENST00000413323 827 ntBASIC15.22■□□□□ 0.03
RAB1AP62820 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RAB1AP62820 SIGLEC30P-201ENST00000455569 941 ntBASIC15.22■□□□□ 0.03
RAB1AP62820 SCARNA2-201ENST00000458748 420 ntBASIC15.22■□□□□ 0.03
RAB1AP62820 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB1AP62820 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RAB1AP62820 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1AP62820 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RAB1AP62820 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1AP62820 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1AP62820 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB1AP62820 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms