Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
RIPPLY3P57055 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.33□□□□□ -0.11
RIPPLY3P57055 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
RIPPLY3P57055 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RIPPLY3P57055 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 ADH5P3-201ENST00000433842 1137 ntBASIC14.33□□□□□ -0.12
RIPPLY3P57055 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.33□□□□□ -0.12
RIPPLY3P57055 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIPPLY3P57055 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.33□□□□□ -0.12
RIPPLY3P57055 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 AC004890.2-204ENST00000481968 304 ntBASIC14.32□□□□□ -0.12
RIPPLY3P57055 AC097493.3-201ENST00000509725 367 ntBASIC14.32□□□□□ -0.12
RIPPLY3P57055 RNA5SP423-201ENST00000517127 109 ntBASIC14.32□□□□□ -0.12
RIPPLY3P57055 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 AC140912.1-201ENST00000577171 1054 ntBASIC14.32□□□□□ -0.12
RIPPLY3P57055 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.32□□□□□ -0.12
RIPPLY3P57055 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 AC008556.1-201ENST00000610908 2040 ntBASIC14.32□□□□□ -0.12
RIPPLY3P57055 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIPPLY3P57055 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RIPPLY3P57055 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms