Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN20P56880 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.9■□□□□ 0.14
CLDN20P56880 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN20P56880 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLDN20P56880 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.9■□□□□ 0.14
CLDN20P56880 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLDN20P56880 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN20P56880 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 AL031008.1-201ENST00000619963 541 ntBASIC15.9■□□□□ 0.14
CLDN20P56880 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CLDN20P56880 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN20P56880 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN20P56880 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN20P56880 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 PCDH8P1-201ENST00000428983 2773 ntBASIC15.89■□□□□ 0.13
CLDN20P56880 UBALD1-205ENST00000590891 2641 ntBASIC15.89■□□□□ 0.13
CLDN20P56880 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN20P56880 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN20P56880 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN20P56880 ABCD1P5-201ENST00000445663 754 ntBASIC15.89■□□□□ 0.13
CLDN20P56880 FAAHP1-202ENST00000446499 1238 ntBASIC15.89■□□□□ 0.13
CLDN20P56880 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 AC079781.3-201ENST00000449110 356 ntBASIC15.89■□□□□ 0.13
CLDN20P56880 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN20P56880 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.89■□□□□ 0.13
CLDN20P56880 AC122714.2-201ENST00000502787 707 ntBASIC15.89■□□□□ 0.13
CLDN20P56880 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CLDN20P56880 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.89■□□□□ 0.13
CLDN20P56880 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN20P56880 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLDN20P56880 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLDN20P56880 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN20P56880 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN20P56880 BX276092.7-203ENST00000637198 1536 ntBASIC15.89■□□□□ 0.13
CLDN20P56880 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
CLDN20P56880 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN20P56880 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN20P56880 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CLDN20P56880 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLDN20P56880 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN20P56880 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms