Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.46■□□□□ 0.23
CLDN8P56748 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN8P56748 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN8P56748 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN8P56748 AC091607.1-201ENST00000490318 1060 ntBASIC16.46■□□□□ 0.23
CLDN8P56748 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN8P56748 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN8P56748 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN8P56748 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN8P56748 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.46■□□□□ 0.23
CLDN8P56748 AC132938.5-201ENST00000624980 1813 ntBASIC16.46■□□□□ 0.23
CLDN8P56748 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN8P56748 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN8P56748 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CLDN8P56748 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CLDN8P56748 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CLDN8P56748 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN8P56748 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN8P56748 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN8P56748 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN8P56748 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
CLDN8P56748 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN8P56748 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 TMPOP1-202ENST00000424642 1267 ntBASIC16.45■□□□□ 0.22
CLDN8P56748 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN8P56748 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 CHCHD2P8-201ENST00000429873 447 ntBASIC16.45■□□□□ 0.22
CLDN8P56748 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 BX276092.5-203ENST00000456199 560 ntBASIC16.45■□□□□ 0.22
CLDN8P56748 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN8P56748 AL121672.3-201ENST00000608644 468 ntBASIC16.45■□□□□ 0.22
CLDN8P56748 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN8P56748 AL121956.5-201ENST00000625261 221 ntBASIC16.45■□□□□ 0.22
CLDN8P56748 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CLDN8P56748 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN8P56748 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN8P56748 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN8P56748 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN8P56748 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN8P56748 FRMD8P1-201ENST00000440433 1524 ntBASIC16.45■□□□□ 0.22
CLDN8P56748 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 PCDHB19P-201ENST00000570871 2371 ntBASIC16.44■□□□□ 0.22
CLDN8P56748 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN8P56748 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN8P56748 AL031133.1-201ENST00000406807 723 ntBASIC16.44■□□□□ 0.22
CLDN8P56748 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN8P56748 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.44■□□□□ 0.22
CLDN8P56748 NTF6B-201ENST00000591913 560 ntBASIC16.44■□□□□ 0.22
CLDN8P56748 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN8P56748 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms