Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC012313.1-201ENST00000593393 3059 ntBASIC15.15■□□□□ 0.02
FOXG1P55316 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXG1P55316 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXG1P55316 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXG1P55316 RPS15P9-201ENST00000494093 319 ntBASIC15.15■□□□□ 0.02
FOXG1P55316 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.15■□□□□ 0.02
FOXG1P55316 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXG1P55316 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXG1P55316 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXG1P55316 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXG1P55316 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXG1P55316 MIR1199-201ENST00000621445 119 ntBASIC15.15■□□□□ 0.02
FOXG1P55316 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 GPR89P-201ENST00000407924 1495 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXG1P55316 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
FOXG1P55316 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 AC108860.2-201ENST00000562760 2183 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXG1P55316 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 AC116353.5-201ENST00000638148 1699 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXG1P55316 AC009947.1-201ENST00000444350 727 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 AL671883.3-201ENST00000603274 991 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 AC005593.1-201ENST00000624894 515 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXG1P55316 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 AC016396.2-201ENST00000562575 1417 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
FOXG1P55316 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 AC093525.9-201ENST00000624961 1746 ntBASIC15.14■□□□□ 0.01
FOXG1P55316 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXG1P55316 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
FOXG1P55316 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXG1P55316 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXG1P55316 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXG1P55316 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXG1P55316 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXG1P55316 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXG1P55316 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXG1P55316 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXG1P55316 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXG1P55316 AC034105.1-201ENST00000563488 319 ntBASIC15.13■□□□□ 0.01
FOXG1P55316 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXG1P55316 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms