Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
PDE1AP54750 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE1AP54750 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE1AP54750 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE1AP54750 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 SART3-203ENST00000546611 1184 ntBASIC21.1■□□□□ 0.97
PDE1AP54750 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.1■□□□□ 0.97
PDE1AP54750 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.1■□□□□ 0.97
PDE1AP54750 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE1AP54750 AC064862.7-201ENST00000604520 867 ntBASIC21.1■□□□□ 0.97
PDE1AP54750 AC008608.2-201ENST00000606089 416 ntBASIC21.1■□□□□ 0.97
PDE1AP54750 AL022326.1-202ENST00000641533 845 ntBASIC21.1■□□□□ 0.97
PDE1AP54750 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PDE1AP54750 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PDE1AP54750 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE1AP54750 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PDE1AP54750 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDE1AP54750 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.09■□□□□ 0.97
PDE1AP54750 IFNL4P1-201ENST00000607083 540 ntBASIC21.09■□□□□ 0.97
PDE1AP54750 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDE1AP54750 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.09■□□□□ 0.97
PDE1AP54750 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE1AP54750 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE1AP54750 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE1AP54750 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PDE1AP54750 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE1AP54750 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE1AP54750 SAPCD2P3-201ENST00000455031 850 ntBASIC21.08■□□□□ 0.97
PDE1AP54750 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PDE1AP54750 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PDE1AP54750 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.08■□□□□ 0.97
PDE1AP54750 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.08■□□□□ 0.97
PDE1AP54750 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.08■□□□□ 0.97
PDE1AP54750 AL353135.1-201ENST00000606729 504 ntBASIC21.08■□□□□ 0.97
PDE1AP54750 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE1AP54750 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE1AP54750 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.08■□□□□ 0.96
PDE1AP54750 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDE1AP54750 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE1AP54750 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PDE1AP54750 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PDE1AP54750 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE1AP54750 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 AGGF1P2-201ENST00000426656 2106 ntBASIC21.07■□□□□ 0.96
PDE1AP54750 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE1AP54750 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 DUSP5P1-201ENST00000441325 1139 ntBASIC21.07■□□□□ 0.96
PDE1AP54750 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PDE1AP54750 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.07■□□□□ 0.96
PDE1AP54750 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.07■□□□□ 0.96
PDE1AP54750 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PDE1AP54750 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PDE1AP54750 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PDE1AP54750 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PDE1AP54750 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE1AP54750 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PDE1AP54750 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE1AP54750 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE1AP54750 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PDE1AP54750 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms