Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PMS1P54277 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.03■□□□□ 0.64
PMS1P54277 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
PMS1P54277 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PMS1P54277 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.03■□□□□ 0.64
PMS1P54277 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PMS1P54277 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.03■□□□□ 0.64
PMS1P54277 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.03■□□□□ 0.64
PMS1P54277 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.03■□□□□ 0.64
PMS1P54277 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PMS1P54277 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.03■□□□□ 0.64
PMS1P54277 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 FRMD8P1-201ENST00000440433 1524 ntBASIC19.03■□□□□ 0.64
PMS1P54277 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.03■□□□□ 0.64
PMS1P54277 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PMS1P54277 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
PMS1P54277 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PMS1P54277 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PMS1P54277 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.03■□□□□ 0.64
PMS1P54277 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PMS1P54277 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.02■□□□□ 0.64
PMS1P54277 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.02■□□□□ 0.64
PMS1P54277 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PMS1P54277 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
PMS1P54277 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 AC099336.1-202ENST00000602961 463 ntBASIC19.02■□□□□ 0.64
PMS1P54277 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
PMS1P54277 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PMS1P54277 TNRC18P3-201ENST00000441896 2691 ntBASIC19.02■□□□□ 0.63
PMS1P54277 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
PMS1P54277 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PMS1P54277 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PMS1P54277 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PMS1P54277 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.02■□□□□ 0.63
PMS1P54277 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PMS1P54277 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.01■□□□□ 0.63
PMS1P54277 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.01■□□□□ 0.63
PMS1P54277 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.01■□□□□ 0.63
PMS1P54277 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.01■□□□□ 0.63
PMS1P54277 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.01■□□□□ 0.63
PMS1P54277 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 ARMC10P1-201ENST00000313754 855 ntBASIC19.01■□□□□ 0.63
PMS1P54277 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.01■□□□□ 0.63
PMS1P54277 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PMS1P54277 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.01■□□□□ 0.63
PMS1P54277 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
PMS1P54277 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.01■□□□□ 0.63
PMS1P54277 NUS1P1-201ENST00000446295 882 ntBASIC19.01■□□□□ 0.63
PMS1P54277 AC104819.1-201ENST00000504587 486 ntBASIC19.01■□□□□ 0.63
PMS1P54277 AC124947.2-201ENST00000547118 1133 ntBASIC19.01■□□□□ 0.63
PMS1P54277 AC012615.1-201ENST00000565797 1299 ntBASIC19.01■□□□□ 0.63
PMS1P54277 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 AC010331.1-201ENST00000611423 582 ntBASIC19.01■□□□□ 0.63
PMS1P54277 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.01■□□□□ 0.63
PMS1P54277 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.01■□□□□ 0.63
PMS1P54277 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PMS1P54277 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 AC004817.3-201ENST00000602957 2129 ntBASIC19■□□□□ 0.63
PMS1P54277 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms