Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.19■□□□□ 0.34
ZNF140P52738 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.19■□□□□ 0.34
ZNF140P52738 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ZNF140P52738 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 AL590787.1-201ENST00000568856 1315 ntBASIC17.19■□□□□ 0.34
ZNF140P52738 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ZNF140P52738 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZNF140P52738 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ZNF140P52738 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF140P52738 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.18■□□□□ 0.34
ZNF140P52738 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF140P52738 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF140P52738 KRT126P-201ENST00000549467 1181 ntBASIC17.18■□□□□ 0.34
ZNF140P52738 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF140P52738 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 AC139887.3-201ENST00000568585 713 ntBASIC17.18■□□□□ 0.34
ZNF140P52738 RN7SL510P-201ENST00000581311 263 ntBASIC17.18■□□□□ 0.34
ZNF140P52738 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 AL121912.1-201ENST00000603683 238 ntBASIC17.18■□□□□ 0.34
ZNF140P52738 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
ZNF140P52738 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF140P52738 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.18■□□□□ 0.34
ZNF140P52738 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF140P52738 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
ZNF140P52738 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ZNF140P52738 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF140P52738 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF140P52738 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 PRORSD1P-202ENST00000563365 2154 ntBASIC17.17■□□□□ 0.34
ZNF140P52738 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 AC004706.3-202ENST00000621574 984 ntBASIC17.17■□□□□ 0.34
ZNF140P52738 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF140P52738 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF140P52738 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.16■□□□□ 0.34
ZNF140P52738 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ZNF140P52738 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 AD000864.1-201ENST00000624076 2295 ntBASIC17.16■□□□□ 0.34
ZNF140P52738 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF140P52738 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.16■□□□□ 0.34
ZNF140P52738 LAGE3P1-201ENST00000425356 484 ntBASIC17.16■□□□□ 0.34
ZNF140P52738 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.16■□□□□ 0.34
ZNF140P52738 AC079781.3-201ENST00000449110 356 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms