Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.94■□□□□ 0.62
CLCN3P51790 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLCN3P51790 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCN3P51790 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCN3P51790 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCN3P51790 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.94■□□□□ 0.62
CLCN3P51790 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCN3P51790 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCN3P51790 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCN3P51790 AC138932.1-201ENST00000534164 6830 ntBASIC18.94■□□□□ 0.62
CLCN3P51790 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLCN3P51790 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCN3P51790 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.93■□□□□ 0.62
CLCN3P51790 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLCN3P51790 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCN3P51790 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CLCN3P51790 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.93■□□□□ 0.62
CLCN3P51790 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCN3P51790 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCN3P51790 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLCN3P51790 AC005829.1-201ENST00000570002 483 ntBASIC18.93■□□□□ 0.62
CLCN3P51790 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 MIR4469-201ENST00000583919 79 ntBASIC18.93■□□□□ 0.62
CLCN3P51790 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCN3P51790 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCN3P51790 ACTL9-202ENST00000612068 1252 ntBASIC18.93■□□□□ 0.62
CLCN3P51790 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCN3P51790 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLCN3P51790 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCN3P51790 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLCN3P51790 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CLCN3P51790 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN3P51790 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.92■□□□□ 0.62
CLCN3P51790 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN3P51790 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCN3P51790 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCN3P51790 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLCN3P51790 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.92■□□□□ 0.62
CLCN3P51790 FAM185BP-201ENST00000443595 716 ntBASIC18.92■□□□□ 0.62
CLCN3P51790 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.92■□□□□ 0.62
CLCN3P51790 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.92■□□□□ 0.62
CLCN3P51790 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.92■□□□□ 0.62
CLCN3P51790 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN3P51790 AP001160.2-201ENST00000596071 487 ntBASIC18.92■□□□□ 0.62
CLCN3P51790 AC023141.13-201ENST00000604991 943 ntBASIC18.92■□□□□ 0.62
CLCN3P51790 C20orf181-201ENST00000623918 480 ntBASIC18.92■□□□□ 0.62
CLCN3P51790 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLCN3P51790 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLCN3P51790 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN3P51790 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN3P51790 AL133373.2-201ENST00000623187 2828 ntBASIC18.92■□□□□ 0.62
CLCN3P51790 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCN3P51790 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN3P51790 AC067852.2-201ENST00000590513 2313 ntBASIC18.91■□□□□ 0.62
CLCN3P51790 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN3P51790 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN3P51790 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN3P51790 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN3P51790 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN3P51790 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN3P51790 GNAS-203ENST00000306120 1878 ntBASIC18.91■□□□□ 0.62
CLCN3P51790 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN3P51790 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN3P51790 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN3P51790 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCN3P51790 AC211486.1-202ENST00000416371 468 ntBASIC18.91■□□□□ 0.62
CLCN3P51790 HTR5BP-201ENST00000430851 1154 ntBASIC18.91■□□□□ 0.62
CLCN3P51790 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCN3P51790 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.91■□□□□ 0.62
CLCN3P51790 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN3P51790 AC211476.1-201ENST00000503899 468 ntBASIC18.91■□□□□ 0.62
CLCN3P51790 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCN3P51790 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCN3P51790 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLCN3P51790 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCN3P51790 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN3P51790 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN3P51790 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN3P51790 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms