Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
CCR9P51686 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.27■□□□□ 0.04
CCR9P51686 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.27■□□□□ 0.04
CCR9P51686 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
CCR9P51686 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 ATP5G1P1-201ENST00000448724 379 ntBASIC15.27■□□□□ 0.04
CCR9P51686 IGHV3-52-201ENST00000519770 353 ntBASIC15.27■□□□□ 0.04
CCR9P51686 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.27■□□□□ 0.04
CCR9P51686 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCR9P51686 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 AC011558.1-201ENST00000623459 338 ntBASIC15.27■□□□□ 0.04
CCR9P51686 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CCR9P51686 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CCR9P51686 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CCR9P51686 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 AC005915.1-201ENST00000624912 2018 ntBASIC15.27■□□□□ 0.03
CCR9P51686 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.27■□□□□ 0.03
CCR9P51686 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CCR9P51686 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 AC010460.3-201ENST00000511359 1579 ntBASIC15.27■□□□□ 0.03
CCR9P51686 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.27■□□□□ 0.03
CCR9P51686 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCR9P51686 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCR9P51686 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CCR9P51686 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCR9P51686 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.26■□□□□ 0.03
CCR9P51686 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.26■□□□□ 0.03
CCR9P51686 AC092597.1-201ENST00000487352 616 ntBASIC15.26■□□□□ 0.03
CCR9P51686 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.26■□□□□ 0.03
CCR9P51686 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCR9P51686 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.26■□□□□ 0.03
CCR9P51686 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CCR9P51686 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CCR9P51686 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCR9P51686 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCR9P51686 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCR9P51686 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.26■□□□□ 0.03
CCR9P51686 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCR9P51686 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCR9P51686 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 BX664615.1-201ENST00000443558 458 ntBASIC15.25■□□□□ 0.03
CCR9P51686 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.25■□□□□ 0.03
CCR9P51686 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CCR9P51686 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.25■□□□□ 0.03
CCR9P51686 AC010203.1-204ENST00000548782 407 ntBASIC15.25■□□□□ 0.03
CCR9P51686 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCR9P51686 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.25■□□□□ 0.03
CCR9P51686 AC005332.3-201ENST00000589904 676 ntBASIC15.25■□□□□ 0.03
CCR9P51686 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.25■□□□□ 0.03
CCR9P51686 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms