Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.01□□□□□ -0.01
HCFC1P51610 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HCFC1P51610 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.01□□□□□ -0.01
HCFC1P51610 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.01□□□□□ -0.01
HCFC1P51610 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.01□□□□□ -0.01
HCFC1P51610 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 AC134043.2-201ENST00000624206 2238 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HCFC1P51610 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15□□□□□ -0.01
HCFC1P51610 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15□□□□□ -0.01
HCFC1P51610 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15□□□□□ -0.01
HCFC1P51610 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15□□□□□ -0.01
HCFC1P51610 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15□□□□□ -0.01
HCFC1P51610 AC008764.6-201ENST00000595909 2069 ntBASIC15□□□□□ -0.01
HCFC1P51610 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15□□□□□ -0.01
HCFC1P51610 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HCFC1P51610 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HCFC1P51610 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HCFC1P51610 SLC25A6P2-201ENST00000497974 877 ntBASIC15□□□□□ -0.01
HCFC1P51610 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15□□□□□ -0.01
HCFC1P51610 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCFC1P51610 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15□□□□□ -0.01
HCFC1P51610 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.99□□□□□ -0.01
HCFC1P51610 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.99□□□□□ -0.01
HCFC1P51610 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.99□□□□□ -0.01
HCFC1P51610 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.99□□□□□ -0.01
HCFC1P51610 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.99□□□□□ -0.01
HCFC1P51610 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.99□□□□□ -0.01
HCFC1P51610 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 AL135999.2-201ENST00000622438 1686 ntBASIC14.99□□□□□ -0.01
HCFC1P51610 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HCFC1P51610 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.99□□□□□ -0.01
HCFC1P51610 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HCFC1P51610 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HCFC1P51610 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.99□□□□□ -0.01
HCFC1P51610 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.99□□□□□ -0.01
HCFC1P51610 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCFC1P51610 AC025678.2-201ENST00000562061 970 ntBASIC14.99□□□□□ -0.01
HCFC1P51610 AC051619.7-201ENST00000568314 623 ntBASIC14.99□□□□□ -0.01
HCFC1P51610 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.99□□□□□ -0.01
HCFC1P51610 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.99□□□□□ -0.01
HCFC1P51610 AC015911.4-201ENST00000588022 1070 ntBASIC14.99□□□□□ -0.01
HCFC1P51610 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HCFC1P51610 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.98□□□□□ -0.01
HCFC1P51610 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HCFC1P51610 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms