Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1EP49674 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1EP49674 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1EP49674 AC004408.2-201ENST00000623613 2777 ntBASIC16.87■□□□□ 0.29
CSNK1EP49674 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CSNK1EP49674 AC140658.5-201ENST00000438532 169 ntBASIC16.87■□□□□ 0.29
CSNK1EP49674 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.87■□□□□ 0.29
CSNK1EP49674 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1EP49674 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1EP49674 FAM86C2P-203ENST00000528684 1004 ntBASIC16.87■□□□□ 0.29
CSNK1EP49674 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.87■□□□□ 0.29
CSNK1EP49674 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1EP49674 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1EP49674 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1EP49674 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1EP49674 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1EP49674 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CSNK1EP49674 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CSNK1EP49674 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1EP49674 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1EP49674 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1EP49674 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 AC092474.2-201ENST00000424288 719 ntBASIC16.86■□□□□ 0.29
CSNK1EP49674 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 COX20P2-201ENST00000452636 358 ntBASIC16.86■□□□□ 0.29
CSNK1EP49674 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1EP49674 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1EP49674 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
CSNK1EP49674 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1EP49674 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.86■□□□□ 0.29
CSNK1EP49674 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1EP49674 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1EP49674 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1EP49674 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.86■□□□□ 0.29
CSNK1EP49674 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1EP49674 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1EP49674 AC009093.7-201ENST00000623853 1223 ntBASIC16.86■□□□□ 0.29
CSNK1EP49674 AL645728.2-201ENST00000641974 660 ntBASIC16.86■□□□□ 0.29
CSNK1EP49674 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1EP49674 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1EP49674 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1EP49674 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1EP49674 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.85■□□□□ 0.29
CSNK1EP49674 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.85■□□□□ 0.29
CSNK1EP49674 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.85■□□□□ 0.29
CSNK1EP49674 AL592309.1-201ENST00000443127 649 ntBASIC16.85■□□□□ 0.29
CSNK1EP49674 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.85■□□□□ 0.29
CSNK1EP49674 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms