Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF4P48230 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF4P48230 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.49■□□□□ 0.71
TM4SF4P48230 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.49■□□□□ 0.71
TM4SF4P48230 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TM4SF4P48230 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TM4SF4P48230 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TM4SF4P48230 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF4P48230 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF4P48230 AC135776.1-201ENST00000319817 2481 ntBASIC19.48■□□□□ 0.71
TM4SF4P48230 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TM4SF4P48230 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TM4SF4P48230 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.48■□□□□ 0.71
TM4SF4P48230 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.48■□□□□ 0.71
TM4SF4P48230 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF4P48230 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.48■□□□□ 0.71
TM4SF4P48230 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF4P48230 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF4P48230 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF4P48230 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF4P48230 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TM4SF4P48230 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.48■□□□□ 0.71
TM4SF4P48230 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF4P48230 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.47■□□□□ 0.71
TM4SF4P48230 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.47■□□□□ 0.71
TM4SF4P48230 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 GNAQP1-201ENST00000444815 1067 ntBASIC19.47■□□□□ 0.71
TM4SF4P48230 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.47■□□□□ 0.71
TM4SF4P48230 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.47■□□□□ 0.71
TM4SF4P48230 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.47■□□□□ 0.71
TM4SF4P48230 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TM4SF4P48230 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.47■□□□□ 0.71
TM4SF4P48230 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.47■□□□□ 0.71
TM4SF4P48230 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TM4SF4P48230 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF4P48230 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
TM4SF4P48230 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.47■□□□□ 0.71
TM4SF4P48230 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TM4SF4P48230 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TM4SF4P48230 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 RPL37AP1-201ENST00000412502 279 ntBASIC19.46■□□□□ 0.71
TM4SF4P48230 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TM4SF4P48230 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.46■□□□□ 0.71
TM4SF4P48230 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TM4SF4P48230 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF4P48230 SLC22A20-204ENST00000530038 1673 ntBASIC19.46■□□□□ 0.71
TM4SF4P48230 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF4P48230 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TM4SF4P48230 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF4P48230 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms