Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LSP1P33241 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 AC096733.2-201ENST00000609937 1394 ntBASIC17.4■□□□□ 0.38
LSP1P33241 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSP1P33241 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.39■□□□□ 0.38
LSP1P33241 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
LSP1P33241 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
LSP1P33241 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LSP1P33241 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.39■□□□□ 0.37
LSP1P33241 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.39■□□□□ 0.37
LSP1P33241 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.39■□□□□ 0.37
LSP1P33241 AC239809.2-201ENST00000415381 517 ntBASIC17.39■□□□□ 0.37
LSP1P33241 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.39■□□□□ 0.37
LSP1P33241 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 AC069544.1-201ENST00000609399 999 ntBASIC17.39■□□□□ 0.37
LSP1P33241 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LSP1P33241 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.39■□□□□ 0.37
LSP1P33241 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.39■□□□□ 0.37
LSP1P33241 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSP1P33241 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.38■□□□□ 0.37
LSP1P33241 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.38■□□□□ 0.37
LSP1P33241 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LSP1P33241 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.38■□□□□ 0.37
LSP1P33241 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.38■□□□□ 0.37
LSP1P33241 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.38■□□□□ 0.37
LSP1P33241 AC008687.5-201ENST00000593746 558 ntBASIC17.38■□□□□ 0.37
LSP1P33241 AC008403.3-201ENST00000598924 454 ntBASIC17.38■□□□□ 0.37
LSP1P33241 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.38■□□□□ 0.37
LSP1P33241 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.38■□□□□ 0.37
LSP1P33241 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSP1P33241 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.37■□□□□ 0.37
LSP1P33241 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LSP1P33241 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LSP1P33241 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.37■□□□□ 0.37
LSP1P33241 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LSP1P33241 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.37■□□□□ 0.37
LSP1P33241 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms