Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.39■□□□□ 0.22
NCK1P16333 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NCK1P16333 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
NCK1P16333 AC011270.2-201ENST00000624293 2550 ntBASIC16.39■□□□□ 0.22
NCK1P16333 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NCK1P16333 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.39■□□□□ 0.21
NCK1P16333 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 HMGA1P5-201ENST00000412453 271 ntBASIC16.39■□□□□ 0.21
NCK1P16333 TSPY15P-201ENST00000457163 923 ntBASIC16.39■□□□□ 0.21
NCK1P16333 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.39■□□□□ 0.21
NCK1P16333 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.39■□□□□ 0.21
NCK1P16333 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.39■□□□□ 0.21
NCK1P16333 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 AL391807.1-203ENST00000604392 2365 ntBASIC16.39■□□□□ 0.21
NCK1P16333 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NCK1P16333 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NCK1P16333 HYMAI-201ENST00000635591 3347 ntBASIC16.39■□□□□ 0.21
NCK1P16333 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.39■□□□□ 0.21
NCK1P16333 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.39■□□□□ 0.21
NCK1P16333 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCK1P16333 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NCK1P16333 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NCK1P16333 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 ECEL1P3-201ENST00000427961 737 ntBASIC16.38■□□□□ 0.21
NCK1P16333 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
NCK1P16333 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 AC008550.1-201ENST00000511500 884 ntBASIC16.38■□□□□ 0.21
NCK1P16333 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NCK1P16333 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 NAPSB-206ENST00000562112 1266 ntBASIC16.38■□□□□ 0.21
NCK1P16333 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NCK1P16333 AL136038.4-201ENST00000603606 1261 ntBASIC16.38■□□□□ 0.21
NCK1P16333 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.38■□□□□ 0.21
NCK1P16333 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
NCK1P16333 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCK1P16333 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NCK1P16333 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.37■□□□□ 0.21
NCK1P16333 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
NCK1P16333 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NCK1P16333 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms