Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 PTCHD3P3-201ENST00000403073 906 ntBASIC13.54□□□□□ -0.24
CD28P10747 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.54□□□□□ -0.24
CD28P10747 LINC00982-205ENST00000420957 435 ntBASIC13.54□□□□□ -0.24
CD28P10747 AC002558.1-201ENST00000488906 803 ntBASIC13.54□□□□□ -0.24
CD28P10747 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.54□□□□□ -0.24
CD28P10747 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.54□□□□□ -0.24
CD28P10747 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 AC092865.6-201ENST00000642101 219 ntBASIC13.54□□□□□ -0.24
CD28P10747 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CD28P10747 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.53□□□□□ -0.24
CD28P10747 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 MYCLP1-201ENST00000372451 1075 ntBASIC13.53□□□□□ -0.24
CD28P10747 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.53□□□□□ -0.24
CD28P10747 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.53□□□□□ -0.24
CD28P10747 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.53□□□□□ -0.24
CD28P10747 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.53□□□□□ -0.24
CD28P10747 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.53□□□□□ -0.24
CD28P10747 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.53□□□□□ -0.24
CD28P10747 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CD28P10747 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.53□□□□□ -0.24
CD28P10747 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CD28P10747 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD28P10747 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD28P10747 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CD28P10747 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.52□□□□□ -0.24
CD28P10747 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.52□□□□□ -0.24
CD28P10747 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.52□□□□□ -0.24
CD28P10747 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CD28P10747 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD28P10747 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms