Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.94■□□□□ 0.14
THBS1P07996 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
THBS1P07996 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 AC092053.1-201ENST00000605787 1936 ntBASIC15.94■□□□□ 0.14
THBS1P07996 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.93■□□□□ 0.14
THBS1P07996 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.93■□□□□ 0.14
THBS1P07996 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.93■□□□□ 0.14
THBS1P07996 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 AC104819.1-201ENST00000504587 486 ntBASIC15.93■□□□□ 0.14
THBS1P07996 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
THBS1P07996 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
THBS1P07996 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
THBS1P07996 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
THBS1P07996 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.93■□□□□ 0.14
THBS1P07996 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
THBS1P07996 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.92■□□□□ 0.14
THBS1P07996 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
THBS1P07996 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.92■□□□□ 0.14
THBS1P07996 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.92■□□□□ 0.14
THBS1P07996 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
THBS1P07996 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
THBS1P07996 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
THBS1P07996 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
THBS1P07996 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 AP000867.4-201ENST00000641616 219 ntBASIC15.92■□□□□ 0.14
THBS1P07996 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
THBS1P07996 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.92■□□□□ 0.14
THBS1P07996 AC105020.1-201ENST00000435356 2205 ntBASIC15.92■□□□□ 0.14
THBS1P07996 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.92■□□□□ 0.14
THBS1P07996 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
THBS1P07996 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.92■□□□□ 0.14
THBS1P07996 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
THBS1P07996 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.92■□□□□ 0.14
THBS1P07996 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.92■□□□□ 0.14
THBS1P07996 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.91■□□□□ 0.14
THBS1P07996 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.91■□□□□ 0.14
THBS1P07996 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
THBS1P07996 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.91■□□□□ 0.14
THBS1P07996 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
THBS1P07996 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
THBS1P07996 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
THBS1P07996 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
THBS1P07996 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms