Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.4□□□□□ -0.1
CTSDP07339 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CTSDP07339 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.39□□□□□ -0.11
CTSDP07339 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.39□□□□□ -0.11
CTSDP07339 MIR1238-201ENST00000408483 83 ntBASIC14.39□□□□□ -0.11
CTSDP07339 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
CTSDP07339 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CTSDP07339 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.39□□□□□ -0.11
CTSDP07339 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CTSDP07339 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CTSDP07339 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSDP07339 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSDP07339 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSDP07339 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSDP07339 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CTSDP07339 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CTSDP07339 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CTSDP07339 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSDP07339 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSDP07339 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CTSDP07339 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSDP07339 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSDP07339 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSDP07339 AL356309.3-201ENST00000624132 1934 ntBASIC14.38□□□□□ -0.11
CTSDP07339 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CTSDP07339 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSDP07339 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSDP07339 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSDP07339 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CTSDP07339 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CTSDP07339 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSDP07339 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms