Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
CAPNS1P04632 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPNS1P04632 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CAPNS1P04632 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPNS1P04632 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 KRT18P41-201ENST00000518924 1277 ntBASIC17.23■□□□□ 0.35
CAPNS1P04632 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPNS1P04632 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPNS1P04632 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPNS1P04632 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPNS1P04632 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPNS1P04632 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CAPNS1P04632 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPNS1P04632 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPNS1P04632 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CAPNS1P04632 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.22■□□□□ 0.35
CAPNS1P04632 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPNS1P04632 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPNS1P04632 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 ABCD1P5-201ENST00000445663 754 ntBASIC17.22■□□□□ 0.35
CAPNS1P04632 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CAPNS1P04632 SNHG9-202ENST00000564014 471 ntBASIC17.22■□□□□ 0.35
CAPNS1P04632 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPNS1P04632 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 AP002414.3-201ENST00000589352 1468 ntBASIC17.22■□□□□ 0.35
CAPNS1P04632 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPNS1P04632 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPNS1P04632 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.21■□□□□ 0.35
CAPNS1P04632 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.21■□□□□ 0.35
CAPNS1P04632 KRT18P55-202ENST00000578578 1546 ntBASIC17.21■□□□□ 0.35
CAPNS1P04632 AC034236.2-201ENST00000606662 1610 ntBASIC17.21■□□□□ 0.35
CAPNS1P04632 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 AL356309.3-201ENST00000624132 1934 ntBASIC17.21■□□□□ 0.35
CAPNS1P04632 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CAPNS1P04632 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CAPNS1P04632 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CAPNS1P04632 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CAPNS1P04632 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.21■□□□□ 0.35
CAPNS1P04632 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPNS1P04632 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.21■□□□□ 0.35
CAPNS1P04632 AP002472.1-201ENST00000577490 586 ntBASIC17.21■□□□□ 0.35
CAPNS1P04632 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.21■□□□□ 0.35
CAPNS1P04632 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.21■□□□□ 0.35
CAPNS1P04632 AC107918.4-202ENST00000641623 219 ntBASIC17.21■□□□□ 0.35
CAPNS1P04632 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.21■□□□□ 0.35
CAPNS1P04632 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPNS1P04632 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CAPNS1P04632 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CAPNS1P04632 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CAPNS1P04632 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms