Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LCATP04180 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.17■□□□□ 0.02
LCATP04180 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.17■□□□□ 0.02
LCATP04180 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.17■□□□□ 0.02
LCATP04180 AC046185.3-201ENST00000623228 1824 ntBASIC15.17■□□□□ 0.02
LCATP04180 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
LCATP04180 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCATP04180 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LCATP04180 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.16■□□□□ 0.02
LCATP04180 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LCATP04180 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.16■□□□□ 0.02
LCATP04180 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LCATP04180 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.16■□□□□ 0.02
LCATP04180 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.16■□□□□ 0.02
LCATP04180 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LCATP04180 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.16■□□□□ 0.02
LCATP04180 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.16■□□□□ 0.02
LCATP04180 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LCATP04180 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LCATP04180 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 AC080080.1-201ENST00000625121 2420 ntBASIC15.15■□□□□ 0.02
LCATP04180 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LCATP04180 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 IGHV3-47-201ENST00000425060 335 ntBASIC15.15■□□□□ 0.02
LCATP04180 ATP5G2P1-201ENST00000433580 426 ntBASIC15.15■□□□□ 0.02
LCATP04180 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 AC012615.1-201ENST00000565797 1299 ntBASIC15.15■□□□□ 0.02
LCATP04180 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.15■□□□□ 0.02
LCATP04180 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.15■□□□□ 0.02
LCATP04180 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 BNIP3P18-201ENST00000593976 575 ntBASIC15.15■□□□□ 0.02
LCATP04180 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.15■□□□□ 0.02
LCATP04180 NPAP1P7-201ENST00000613027 823 ntBASIC15.15■□□□□ 0.02
LCATP04180 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.15■□□□□ 0.02
LCATP04180 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.15■□□□□ 0.02
LCATP04180 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.15■□□□□ 0.02
LCATP04180 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms