Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.16■□□□□ 0.5
APOEP02649 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
APOEP02649 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
APOEP02649 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
APOEP02649 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.15■□□□□ 0.5
APOEP02649 AC026396.1-201ENST00000419388 421 ntBASIC18.15■□□□□ 0.5
APOEP02649 BX005266.1-201ENST00000473402 457 ntBASIC18.15■□□□□ 0.5
APOEP02649 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.15■□□□□ 0.5
APOEP02649 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.15■□□□□ 0.5
APOEP02649 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.15■□□□□ 0.5
APOEP02649 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.15■□□□□ 0.5
APOEP02649 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
APOEP02649 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
APOEP02649 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.15■□□□□ 0.5
APOEP02649 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
APOEP02649 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOEP02649 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.14■□□□□ 0.5
APOEP02649 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APOEP02649 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.14■□□□□ 0.5
APOEP02649 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APOEP02649 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
APOEP02649 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.14■□□□□ 0.5
APOEP02649 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 AC009336.1-201ENST00000608941 1553 ntBASIC18.14■□□□□ 0.49
APOEP02649 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 AL023806.1-201ENST00000603994 1649 ntBASIC18.14■□□□□ 0.49
APOEP02649 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 KRT18P67-201ENST00000432816 1264 ntBASIC18.14■□□□□ 0.49
APOEP02649 SIGLEC30P-201ENST00000455569 941 ntBASIC18.14■□□□□ 0.49
APOEP02649 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.14■□□□□ 0.49
APOEP02649 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.14■□□□□ 0.49
APOEP02649 AL139327.4-201ENST00000612362 153 ntBASIC18.14■□□□□ 0.49
APOEP02649 AL022326.1-202ENST00000641533 845 ntBASIC18.14■□□□□ 0.49
APOEP02649 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.14■□□□□ 0.49
APOEP02649 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOEP02649 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
APOEP02649 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOEP02649 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOEP02649 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOEP02649 AC080080.1-201ENST00000625121 2420 ntBASIC18.13■□□□□ 0.49
APOEP02649 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
APOEP02649 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.13■□□□□ 0.49
APOEP02649 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
APOEP02649 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOEP02649 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.13■□□□□ 0.49
APOEP02649 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOEP02649 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
APOEP02649 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOEP02649 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOEP02649 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.13■□□□□ 0.49
APOEP02649 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms