Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.59■□□□□ 0.89
MBD4O95243 AC116353.5-201ENST00000638148 1699 ntBASIC20.59■□□□□ 0.89
MBD4O95243 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD4O95243 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD4O95243 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD4O95243 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MBD4O95243 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD4O95243 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.59■□□□□ 0.89
MBD4O95243 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
MBD4O95243 MRPL20P1-201ENST00000400819 433 ntBASIC20.59■□□□□ 0.89
MBD4O95243 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.59■□□□□ 0.89
MBD4O95243 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.59■□□□□ 0.89
MBD4O95243 VN2R19P-201ENST00000442399 1052 ntBASIC20.59■□□□□ 0.89
MBD4O95243 KRT18P3-201ENST00000451602 1288 ntBASIC20.59■□□□□ 0.89
MBD4O95243 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
MBD4O95243 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.59■□□□□ 0.89
MBD4O95243 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.59■□□□□ 0.89
MBD4O95243 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.59■□□□□ 0.89
MBD4O95243 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.59■□□□□ 0.89
MBD4O95243 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.59■□□□□ 0.89
MBD4O95243 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MBD4O95243 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MBD4O95243 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MBD4O95243 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD4O95243 AC093525.9-201ENST00000624961 1746 ntBASIC20.58■□□□□ 0.89
MBD4O95243 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MBD4O95243 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD4O95243 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
MBD4O95243 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MBD4O95243 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD4O95243 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD4O95243 AL591424.1-201ENST00000442569 1213 ntBASIC20.58■□□□□ 0.89
MBD4O95243 KRT18P2-201ENST00000447938 1258 ntBASIC20.58■□□□□ 0.89
MBD4O95243 PAWRP1-201ENST00000451083 565 ntBASIC20.58■□□□□ 0.89
MBD4O95243 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.58■□□□□ 0.89
MBD4O95243 PGAM5P1-201ENST00000518923 814 ntBASIC20.58■□□□□ 0.89
MBD4O95243 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.58■□□□□ 0.89
MBD4O95243 GGTLC5P-201ENST00000617623 998 ntBASIC20.58■□□□□ 0.89
MBD4O95243 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
MBD4O95243 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MBD4O95243 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.58■□□□□ 0.88
MBD4O95243 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
MBD4O95243 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MBD4O95243 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
MBD4O95243 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
MBD4O95243 PCDHB18P-201ENST00000524813 2368 ntBASIC20.58■□□□□ 0.88
MBD4O95243 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MBD4O95243 AC138932.1-201ENST00000534164 6830 ntBASIC20.58■□□□□ 0.88
MBD4O95243 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MBD4O95243 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.57■□□□□ 0.88
MBD4O95243 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 CRYGEP-201ENST00000412192 528 ntBASIC20.57■□□□□ 0.88
MBD4O95243 IGLL3P-201ENST00000412472 434 ntBASIC20.57■□□□□ 0.88
MBD4O95243 EGFEM1P-202ENST00000431685 1563 ntBASIC20.57■□□□□ 0.88
MBD4O95243 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.57■□□□□ 0.88
MBD4O95243 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.57■□□□□ 0.88
MBD4O95243 PRSS29P-201ENST00000440800 595 ntBASIC20.57■□□□□ 0.88
MBD4O95243 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.57■□□□□ 0.88
MBD4O95243 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.57■□□□□ 0.88
MBD4O95243 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MBD4O95243 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
MBD4O95243 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.57■□□□□ 0.88
MBD4O95243 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.57■□□□□ 0.88
MBD4O95243 AC141586.5-201ENST00000624546 2050 ntBASIC20.57■□□□□ 0.88
MBD4O95243 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.57■□□□□ 0.88
MBD4O95243 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.56■□□□□ 0.88
MBD4O95243 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.56■□□□□ 0.88
MBD4O95243 PMS2P7-201ENST00000506558 1336 ntBASIC20.56■□□□□ 0.88
MBD4O95243 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.56■□□□□ 0.88
MBD4O95243 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.56■□□□□ 0.88
MBD4O95243 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.56■□□□□ 0.88
MBD4O95243 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MBD4O95243 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
MBD4O95243 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 HCG4B-203ENST00000450128 991 ntBASIC20.56■□□□□ 0.88
MBD4O95243 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.56■□□□□ 0.88
MBD4O95243 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.56■□□□□ 0.88
MBD4O95243 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.56■□□□□ 0.88
MBD4O95243 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.56■□□□□ 0.88
MBD4O95243 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms