Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.65■■□□□ 1.22
LTN1O94822 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.65■■□□□ 1.22
LTN1O94822 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC22.64■■□□□ 1.22
LTN1O94822 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTN1O94822 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTN1O94822 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LTN1O94822 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTN1O94822 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LTN1O94822 COPE-202ENST00000349893 948 ntTSL 2 BASIC22.64■■□□□ 1.22
LTN1O94822 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.64■■□□□ 1.22
LTN1O94822 SPDYE7P-202ENST00000420373 878 ntBASIC22.64■■□□□ 1.22
LTN1O94822 AC092474.2-201ENST00000424288 719 ntBASIC22.64■■□□□ 1.22
LTN1O94822 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.64■■□□□ 1.22
LTN1O94822 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.64■■□□□ 1.22
LTN1O94822 FAM207CP-201ENST00000443486 507 ntBASIC22.64■■□□□ 1.22
LTN1O94822 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.64■■□□□ 1.22
LTN1O94822 SATB1-217ENST00000493952 626 ntTSL 3 BASIC22.64■■□□□ 1.22
LTN1O94822 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.64■■□□□ 1.22
LTN1O94822 POLD4-211ENST00000539074 714 ntTSL 3 BASIC22.64■■□□□ 1.22
LTN1O94822 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
LTN1O94822 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LTN1O94822 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.64■■□□□ 1.21
LTN1O94822 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LTN1O94822 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LTN1O94822 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC22.64■■□□□ 1.21
LTN1O94822 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
LTN1O94822 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.64■■□□□ 1.21
LTN1O94822 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.64■■□□□ 1.21
LTN1O94822 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.64■■□□□ 1.21
LTN1O94822 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LTN1O94822 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LTN1O94822 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.64■■□□□ 1.21
LTN1O94822 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
LTN1O94822 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC22.63■■□□□ 1.21
LTN1O94822 AC008267.7-201ENST00000624570 1194 ntBASIC22.63■■□□□ 1.21
LTN1O94822 AC008761.3-201ENST00000624803 892 ntBASIC22.63■■□□□ 1.21
LTN1O94822 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 AC116353.5-201ENST00000638148 1699 ntBASIC22.63■■□□□ 1.21
LTN1O94822 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.63■■□□□ 1.21
LTN1O94822 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC22.63■■□□□ 1.21
LTN1O94822 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC22.63■■□□□ 1.21
LTN1O94822 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC22.63■■□□□ 1.21
LTN1O94822 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.63■■□□□ 1.21
LTN1O94822 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
LTN1O94822 KRT8P23-201ENST00000560090 1207 ntBASIC22.63■■□□□ 1.21
LTN1O94822 AC027307.2-201ENST00000591252 911 ntBASIC22.63■■□□□ 1.21
LTN1O94822 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
LTN1O94822 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LTN1O94822 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
LTN1O94822 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.62■■□□□ 1.21
LTN1O94822 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC22.62■■□□□ 1.21
LTN1O94822 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
LTN1O94822 MIR943-201ENST00000401286 94 ntBASIC22.62■■□□□ 1.21
LTN1O94822 TSPY16P-201ENST00000449843 468 ntBASIC22.62■■□□□ 1.21
LTN1O94822 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LTN1O94822 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.62■■□□□ 1.21
LTN1O94822 AC135050.7-201ENST00000624508 2218 ntBASIC22.62■■□□□ 1.21
LTN1O94822 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 LINC00895-201ENST00000629028 1637 ntBASIC22.62■■□□□ 1.21
LTN1O94822 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.62■■□□□ 1.21
LTN1O94822 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.62■■□□□ 1.21
LTN1O94822 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LTN1O94822 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.61■■□□□ 1.21
LTN1O94822 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.61■■□□□ 1.21
LTN1O94822 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.61■■□□□ 1.21
LTN1O94822 SLC25A6P5-201ENST00000435663 894 ntBASIC22.61■■□□□ 1.21
LTN1O94822 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.61■■□□□ 1.21
LTN1O94822 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms