Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NDUFS3O75489 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.27■□□□□ 0.36
NDUFS3O75489 HCG4P8-203ENST00000443049 980 ntBASIC17.27■□□□□ 0.36
NDUFS3O75489 KRT16P4-201ENST00000453883 522 ntBASIC17.27■□□□□ 0.36
NDUFS3O75489 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.27■□□□□ 0.36
NDUFS3O75489 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.27■□□□□ 0.36
NDUFS3O75489 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.27■□□□□ 0.36
NDUFS3O75489 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.27■□□□□ 0.36
NDUFS3O75489 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NDUFS3O75489 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFS3O75489 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFS3O75489 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
NDUFS3O75489 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFS3O75489 PMPCAP1-201ENST00000508114 1576 ntBASIC17.27■□□□□ 0.35
NDUFS3O75489 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFS3O75489 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.27■□□□□ 0.35
NDUFS3O75489 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFS3O75489 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFS3O75489 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFS3O75489 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.26■□□□□ 0.35
NDUFS3O75489 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NDUFS3O75489 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 MIR3652-201ENST00000579335 131 ntBASIC17.26■□□□□ 0.35
NDUFS3O75489 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.26■□□□□ 0.35
NDUFS3O75489 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.26■□□□□ 0.35
NDUFS3O75489 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NDUFS3O75489 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NDUFS3O75489 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NDUFS3O75489 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.26■□□□□ 0.35
NDUFS3O75489 AL135999.2-201ENST00000622438 1686 ntBASIC17.26■□□□□ 0.35
NDUFS3O75489 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS3O75489 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS3O75489 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NDUFS3O75489 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS3O75489 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFS3O75489 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFS3O75489 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS3O75489 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 ABCD1P5-201ENST00000445663 754 ntBASIC17.25■□□□□ 0.35
NDUFS3O75489 FOSL1P1-201ENST00000511041 816 ntBASIC17.25■□□□□ 0.35
NDUFS3O75489 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS3O75489 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS3O75489 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS3O75489 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS3O75489 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.25■□□□□ 0.35
NDUFS3O75489 AP000867.4-201ENST00000641616 219 ntBASIC17.25■□□□□ 0.35
NDUFS3O75489 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NDUFS3O75489 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFS3O75489 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NDUFS3O75489 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS3O75489 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS3O75489 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
NDUFS3O75489 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.24■□□□□ 0.35
NDUFS3O75489 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.24■□□□□ 0.35
NDUFS3O75489 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms