Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC097637.2-201ENST00000624096 1997 ntBASIC17.99■□□□□ 0.47
LRCH4O75427 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH4O75427 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.99■□□□□ 0.47
LRCH4O75427 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.99■□□□□ 0.47
LRCH4O75427 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.99■□□□□ 0.47
LRCH4O75427 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.99■□□□□ 0.47
LRCH4O75427 AL121772.3-201ENST00000610840 674 ntBASIC17.99■□□□□ 0.47
LRCH4O75427 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.99■□□□□ 0.47
LRCH4O75427 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.99■□□□□ 0.47
LRCH4O75427 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH4O75427 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH4O75427 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH4O75427 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
LRCH4O75427 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH4O75427 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
LRCH4O75427 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRCH4O75427 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
LRCH4O75427 FRMD8P1-201ENST00000440433 1524 ntBASIC17.98■□□□□ 0.47
LRCH4O75427 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRCH4O75427 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.98■□□□□ 0.47
LRCH4O75427 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 RBM17P3-201ENST00000417687 1192 ntBASIC17.98■□□□□ 0.47
LRCH4O75427 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRCH4O75427 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.98■□□□□ 0.47
LRCH4O75427 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.98■□□□□ 0.47
LRCH4O75427 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.98■□□□□ 0.47
LRCH4O75427 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.98■□□□□ 0.47
LRCH4O75427 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.98■□□□□ 0.47
LRCH4O75427 GPR89P-201ENST00000407924 1495 ntBASIC17.98■□□□□ 0.47
LRCH4O75427 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRCH4O75427 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
LRCH4O75427 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.98■□□□□ 0.47
LRCH4O75427 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.98■□□□□ 0.47
LRCH4O75427 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH4O75427 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRCH4O75427 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRCH4O75427 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH4O75427 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
LRCH4O75427 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
LRCH4O75427 AGGF1P2-201ENST00000426656 2106 ntBASIC17.97■□□□□ 0.47
LRCH4O75427 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.97■□□□□ 0.47
LRCH4O75427 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRCH4O75427 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.97■□□□□ 0.47
LRCH4O75427 PRELID1P1-202ENST00000567272 903 ntBASIC17.97■□□□□ 0.47
LRCH4O75427 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH4O75427 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH4O75427 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
LRCH4O75427 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH4O75427 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRCH4O75427 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
LRCH4O75427 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.96■□□□□ 0.47
LRCH4O75427 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.96■□□□□ 0.47
LRCH4O75427 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.96■□□□□ 0.47
LRCH4O75427 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms