Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD6O43541 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
SMAD6O43541 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 AC064836.3-201ENST00000607928 673 ntBASIC17.44■□□□□ 0.38
SMAD6O43541 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 AC016396.2-201ENST00000562575 1417 ntBASIC17.44■□□□□ 0.38
SMAD6O43541 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SMAD6O43541 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 PCDHB18P-201ENST00000524813 2368 ntBASIC17.44■□□□□ 0.38
SMAD6O43541 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD6O43541 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SMAD6O43541 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD6O43541 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD6O43541 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.44■□□□□ 0.38
SMAD6O43541 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD6O43541 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMAD6O43541 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SMAD6O43541 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SMAD6O43541 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SMAD6O43541 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SMAD6O43541 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SMAD6O43541 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMAD6O43541 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SMAD6O43541 CRYGEP-201ENST00000412192 528 ntBASIC17.43■□□□□ 0.38
SMAD6O43541 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 PRSS29P-201ENST00000440800 595 ntBASIC17.43■□□□□ 0.38
SMAD6O43541 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.43■□□□□ 0.38
SMAD6O43541 GGTLC5P-201ENST00000617623 998 ntBASIC17.43■□□□□ 0.38
SMAD6O43541 AC093525.9-201ENST00000624961 1746 ntBASIC17.43■□□□□ 0.38
SMAD6O43541 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SMAD6O43541 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD6O43541 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.42■□□□□ 0.38
SMAD6O43541 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 MRPL20P1-201ENST00000400819 433 ntBASIC17.42■□□□□ 0.38
SMAD6O43541 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMAD6O43541 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.42■□□□□ 0.38
SMAD6O43541 HCG4B-203ENST00000450128 991 ntBASIC17.42■□□□□ 0.38
SMAD6O43541 PAWRP1-201ENST00000451083 565 ntBASIC17.42■□□□□ 0.38
SMAD6O43541 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 AC141586.5-201ENST00000624546 2050 ntBASIC17.42■□□□□ 0.38
SMAD6O43541 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.42■□□□□ 0.38
SMAD6O43541 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SMAD6O43541 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 AC116353.5-201ENST00000638148 1699 ntBASIC17.42■□□□□ 0.38
SMAD6O43541 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD6O43541 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD6O43541 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 IGLL3P-201ENST00000412472 434 ntBASIC17.41■□□□□ 0.38
SMAD6O43541 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.41■□□□□ 0.38
SMAD6O43541 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.41■□□□□ 0.38
SMAD6O43541 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.41■□□□□ 0.38
SMAD6O43541 AC010654.1-201ENST00000615722 808 ntBASIC17.41■□□□□ 0.38
SMAD6O43541 AC023511.2-201ENST00000618803 211 ntBASIC17.41■□□□□ 0.38
SMAD6O43541 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.41■□□□□ 0.38
SMAD6O43541 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms