Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH17O14917 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PCDH17O14917 HLA-A-201ENST00000376802 1334 ntBASIC16.56■□□□□ 0.24
PCDH17O14917 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH17O14917 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
PCDH17O14917 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDH17O14917 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDH17O14917 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH17O14917 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDH17O14917 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDH17O14917 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 AC006538.3-201ENST00000612495 578 ntBASIC16.56■□□□□ 0.24
PCDH17O14917 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH17O14917 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDH17O14917 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDH17O14917 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH17O14917 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH17O14917 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 CROCCP2-202ENST00000412962 2773 ntBASIC16.55■□□□□ 0.24
PCDH17O14917 BX276092.7-203ENST00000637198 1536 ntBASIC16.55■□□□□ 0.24
PCDH17O14917 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH17O14917 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDH17O14917 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH17O14917 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PCDH17O14917 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDH17O14917 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDH17O14917 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDH17O14917 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 AD001527.2-201ENST00000622994 785 ntBASIC16.55■□□□□ 0.24
PCDH17O14917 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH17O14917 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
PCDH17O14917 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDH17O14917 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 AC133963.1-201ENST00000504166 1679 ntBASIC16.55■□□□□ 0.24
PCDH17O14917 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDH17O14917 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH17O14917 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH17O14917 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 AC124067.4-201ENST00000519691 2379 ntBASIC16.55■□□□□ 0.24
PCDH17O14917 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH17O14917 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PCDH17O14917 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH17O14917 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH17O14917 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH17O14917 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH17O14917 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH17O14917 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH17O14917 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH17O14917 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH17O14917 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH17O14917 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH17O14917 AC018712.1-201ENST00000455767 687 ntBASIC16.54■□□□□ 0.24
PCDH17O14917 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDH17O14917 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms