Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN4O14493 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN4O14493 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN4O14493 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN4O14493 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
CLDN4O14493 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN4O14493 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN4O14493 LAGE3P1-201ENST00000425356 484 ntBASIC16.31■□□□□ 0.2
CLDN4O14493 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN4O14493 AC093909.1-201ENST00000504731 1122 ntBASIC16.31■□□□□ 0.2
CLDN4O14493 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN4O14493 OR7E14P-202ENST00000530490 1290 ntBASIC16.31■□□□□ 0.2
CLDN4O14493 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN4O14493 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN4O14493 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CLDN4O14493 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN4O14493 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN4O14493 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN4O14493 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN4O14493 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN4O14493 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN4O14493 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN4O14493 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN4O14493 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLDN4O14493 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN4O14493 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN4O14493 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN4O14493 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN4O14493 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.3■□□□□ 0.2
CLDN4O14493 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN4O14493 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.3■□□□□ 0.2
CLDN4O14493 AC006557.2-201ENST00000592985 1240 ntBASIC16.3■□□□□ 0.2
CLDN4O14493 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN4O14493 AC025062.2-201ENST00000605477 670 ntBASIC16.3■□□□□ 0.2
CLDN4O14493 AC107918.4-202ENST00000641623 219 ntBASIC16.3■□□□□ 0.2
CLDN4O14493 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN4O14493 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN4O14493 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN4O14493 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN4O14493 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN4O14493 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN4O14493 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN4O14493 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN4O14493 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN4O14493 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN4O14493 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN4O14493 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN4O14493 RPS2P1-201ENST00000434010 821 ntBASIC16.29■□□□□ 0.2
CLDN4O14493 AC018712.1-201ENST00000455767 687 ntBASIC16.29■□□□□ 0.2
CLDN4O14493 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN4O14493 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN4O14493 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN4O14493 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN4O14493 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN4O14493 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN4O14493 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN4O14493 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms