Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 RNPS1P1-201ENST00000507437 918 ntBASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AC006557.2-201ENST00000592985 1240 ntBASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AC139713.2-201ENST00000641328 2723 ntBASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 LYSMD4-203ENST00000378904 2122 ntBASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 LAGE3P1-201ENST00000425356 484 ntBASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 SART3-203ENST00000546611 1184 ntBASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AL773604.1-201ENST00000617417 272 ntBASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AL031008.1-201ENST00000619963 541 ntBASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 CROCCP1-201ENST00000426910 5675 ntBASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 AC124067.4-201ENST00000519691 2379 ntBASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SMIM9A6NGZ8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 PRORSD1P-202ENST00000563365 2154 ntBASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 FER1L4-210ENST00000615531 5998 ntBASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM9A6NGZ8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms