Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3BA6NDS4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TBC1D3BA6NDS4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.52■□□□□ 0.39
TBC1D3BA6NDS4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TBC1D3BA6NDS4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.52■□□□□ 0.39
TBC1D3BA6NDS4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TBC1D3BA6NDS4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TBC1D3BA6NDS4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
TBC1D3BA6NDS4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 AC012317.2-201ENST00000623305 2251 ntBASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 HMGN1P19-201ENST00000436976 333 ntBASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 PAWRP1-201ENST00000451083 565 ntBASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 AC091812.2-201ENST00000619081 385 ntBASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TBC1D3BA6NDS4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms