Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LOC102724428A0A0B4J2F2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 AL353732.1-201ENST00000569618 1459 ntBASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC004890.2-204ENST00000481968 304 ntBASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC027307.2-201ENST00000591252 911 ntBASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 LINC00304-203ENST00000565008 1864 ntBASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.79■■□□□ 1.08
LOC102724428A0A0B4J2F2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 AL138781.2-201ENST00000617896 1843 ntBASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 SERBP1P5-201ENST00000510079 1181 ntBASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LOC102724428A0A0B4J2F2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 RNU1-129P-201ENST00000384064 167 ntBASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 MRPS18AP1-201ENST00000414458 589 ntBASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 U1.21-201ENST00000580816 167 ntBASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 MIR4453-201ENST00000584019 89 ntBASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 AC090164.3-201ENST00000610780 2143 ntBASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
LOC102724428A0A0B4J2F2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LOC102724428A0A0B4J2F2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LOC102724428A0A0B4J2F2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms